BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A11SP1|AL425972
(808 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1010 1294 0.0
3x_Contig1654 311 1e-84
>3x_Contig1010
Length = 3652
Score = 1294 bits (653), Expect = 0.0
Identities = 653/653 (100%)
Strand = Plus / Minus
Query: 1 aaagcatcagcaacagacggttagtggatggtggggcgtgcgaaaggttggattctgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aaagcatcagcaacagacggttagtggatggtggggcgtgcgaaaggttggattctgtat 618
Query: 61 ttaatttgtggaagagtagataagcacaccagatcaactcagtacagtttaacgaatgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttaatttgtggaagagtagataagcacaccagatcaactcagtacagtttaacgaatgag 558
Query: 121 cgcaaaaatcccagctatctagacatttccaatagtacgcatcattatgggacaaattag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cgcaaaaatcccagctatctagacatttccaatagtacgcatcattatgggacaaattag 498
Query: 181 atttaatcatatctgtaatgtcaatataatcccaaatcggcaccctttcccttttcaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atttaatcatatctgtaatgtcaatataatcccaaatcggcaccctttcccttttcaatc 438
Query: 241 tatcattagaatttacatatgcaagatgtgatgccatggtgtacaaattattggaacaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tatcattagaatttacatatgcaagatgtgatgccatggtgtacaaattattggaacaag 378
Query: 301 gtaggtcatgatgttcttccgatccgtctgtcaaagattctgaacctgaatacatccatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gtaggtcatgatgttcttccgatccgtctgtcaaagattctgaacctgaatacatccatc 318
Query: 361 tgtaaacactcgatattctatccatatcctcatctgaatcatcgttaccgatcatatcgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tgtaaacactcgatattctatccatatcctcatctgaatcatcgttaccgatcatatcgg 258
Query: 421 tgttgagaataacagactcataatagtcaatgaaattcgcagatgggacacacatcacat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tgttgagaataacagactcataatagtcaatgaaattcgcagatgggacacacatcacat 198
Query: 481 tgaaacatgggaacatatcagaaataaaacaggataaagtttctgggtccattgaattca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tgaaacatgggaacatatcagaaataaaacaggataaagtttctgggtccattgaattca 138
Query: 541 acacagaggtagacctaagtttcgttctaatgggatcataacaaatgaacaaacacgaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 acacagaggtagacctaagtttcgttctaatgggatcataacaaatgaacaaacacgaac 78
Query: 601 cttcaaacgtcatggatttatcttgtagtcgtttctggaaaaaccacatcata 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 cttcaaacgtcatggatttatcttgtagtcgtttctggaaaaaccacatcata 25
>3x_Contig1654
Length = 17174
Score = 311 bits (157), Expect = 1e-84
Identities = 166/169 (98%)
Strand = Plus / Plus
Query: 640 aaaaccacatcataacttgtgtaacggaatcaaacttttgaatagaaacatgatccgaat 699
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3 aaaaccacatcataacttgtgtaacggaatcaaacggttgaatagaaacatgatccgaat 62
Query: 700 ctcgtgataaccgttttattacttcgacacacggtcccacacaacaaacatgaacagtca 759
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ctcgtgataaccggtttattacttcgacacacggtcccacacaacaaacatgaacagtca 122
Query: 760 tctcagaacaggttttcttgtctctatcagatataatcgttatcaaaca 808
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tctcagaacaggttttcttgtctctatcagatataatcgttatcaaaca 171
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5912
Number of Sequences: 1807
Number of extensions: 5912
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 2
length of query: 808
length of database: 10,358,551
effective HSP length: 16
effective length of query: 792
effective length of database: 10,329,639
effective search space: 8181074088
effective search space used: 8181074088
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)